Should you encounter any unexpected behaviour,
please let us know.

* HYDROLASE (SULFHYDRYL PROTEINASE) 01-NOV-76 2PAD *

CA distance fluctuations for 240110231412668287

--- normal mode 8 ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok

largest increase ref largest decrease
VAL 5 0.19 ILE 1 -0.29 VAL 210

PRO 15 0.19 PRO 2 -0.32 ASN 212

PRO 15 0.18 GLU 3 -0.28 ASN 212

PRO 15 0.22 TYR 4 -0.28 ASN 212

PRO 15 0.20 VAL 5 -0.25 ASN 212

PRO 15 0.26 ASP 6 -0.24 ARG 41

PRO 15 0.24 TRP 7 -0.26 ILE 40

PRO 15 0.37 ARG 8 -0.31 GLY 146

PRO 15 0.36 GLN 9 -0.34 GLY 146

PRO 15 0.22 LYS 10 -0.34 ARG 41

ILE 1 0.17 GLY 11 -0.35 GLU 183

ASN 127 0.16 ALA 12 -0.31 GLU 183

TRP 7 0.17 VAL 13 -0.31 ASN 184

GLN 9 0.24 THR 14 -0.40 ASN 184

ARG 8 0.37 PRO 15 -0.35 ASN 184

LYS 17 0.29 VAL 16 -0.27 GLN 47

VAL 16 0.29 LYS 17 -0.31 GLY 178

THR 179 0.24 ASN 18 -0.23 ASP 158

GLY 178 0.27 GLN 19 -0.25 ASP 158

GLY 180 0.45 GLY 20 -0.33 ASP 158

GLY 180 0.52 SER 21 -0.42 ASP 158

GLY 180 0.41 CYS 22 -0.29 SER 205

GLN 142 0.55 GLY 23 -0.33 SER 205

TRP 177 0.40 SER 24 -0.30 SER 205

TRP 177 0.41 CYS 25 -0.29 SER 205

ALA 137 0.37 TRP 26 -0.30 SER 205

ALA 137 0.27 ALA 27 -0.18 SER 205

ARG 8 0.15 PHE 28 -0.17 SER 205

ALA 160 0.17 SER 29 -0.15 SER 205

ASP 158 0.26 ALA 30 -0.11 SER 124

ASP 158 0.17 VAL 31 -0.12 VAL 16

ASP 158 0.12 VAL 32 -0.16 ASN 184

ASP 158 0.20 THR 33 -0.13 ASN 184

ASP 158 0.22 ILE 34 -0.15 ASN 184

ASP 158 0.14 GLU 35 -0.21 ASN 184

GLN 128 0.17 GLY 36 -0.23 ASN 184

VAL 113 0.20 ILE 37 -0.23 TRP 7

VAL 113 0.16 ILE 38 -0.22 ASN 184

VAL 113 0.16 LYS 39 -0.25 ASN 184

ASN 127 0.21 ILE 40 -0.32 LYS 10

VAL 113 0.22 ARG 41 -0.34 LYS 10

VAL 113 0.17 THR 42 -0.24 LYS 10

VAL 113 0.16 GLY 43 -0.28 ASN 184

VAL 113 0.13 ASN 44 -0.30 ASN 184

ASN 127 0.14 LEU 45 -0.32 ASN 184

GLN 47 0.15 ASN 46 -0.30 ASN 184

ASN 46 0.15 GLN 47 -0.27 ASN 184

ASP 158 0.10 TYR 48 -0.19 VAL 16

GLN 9 0.11 SER 49 -0.10 VAL 16

LYS 139 0.14 GLU 50 -0.12 SER 205

LYS 139 0.16 GLN 51 -0.14 SER 205

ALA 137 0.21 GLU 52 -0.09 ALA 71

ALA 137 0.29 LEU 53 -0.14 ALA 71

ALA 137 0.32 LEU 54 -0.16 GLN 114

ALA 137 0.31 ASP 55 -0.14 GLN 114

ALA 137 0.35 CYS 56 -0.13 ARG 111

ALA 137 0.44 ASP 57 -0.18 ARG 111

ALA 137 0.52 ARG 58 -0.19 ARG 111

ALA 137 0.61 ARG 59 -0.22 ARG 111

ALA 137 0.65 SER 60 -0.25 GLN 114

ALA 137 0.65 TYR 61 -0.25 GLN 114

ALA 137 0.46 GLY 62 -0.23 SER 205

GLN 142 0.45 CYS 63 -0.26 SER 205

GLN 142 0.64 ASN 64 -0.31 SER 205

ALA 137 0.80 GLY 65 -0.32 SER 205

ALA 137 0.71 GLY 66 -0.30 GLN 114

ASP 158 0.90 TYR 67 -0.29 GLN 114

ASP 158 0.60 PRO 68 -0.20 GLN 114

ASP 158 0.69 TRP 69 -0.30 ARG 111

ASP 158 0.68 SER 70 -0.25 ARG 111

ASP 158 0.49 ALA 71 -0.14 LEU 53

ASP 158 0.44 LEU 72 -0.17 SER 124

ASP 158 0.52 GLN 73 -0.19 ILE 1

ASP 158 0.47 LEU 74 -0.14 ILE 1

ASP 158 0.37 VAL 75 -0.13 PRO 2

ASP 158 0.37 ALA 76 -0.19 PRO 2

ASP 158 0.40 GLN 77 -0.19 ILE 1

ASP 158 0.36 TYR 78 -0.15 PRO 2

ASP 158 0.31 GLY 79 -0.12 PRO 2

ASP 158 0.25 ILE 80 -0.11 VAL 16

ASP 158 0.16 HIS 81 -0.14 ASN 184

ASP 158 0.09 TYR 82 -0.20 ASN 184

GLN 9 0.14 ARG 83 -0.19 THR 179

GLN 9 0.15 ASN 84 -0.20 THR 179

GLN 9 0.09 THR 85 -0.16 THR 179

GLN 9 0.11 TYR 86 -0.09 THR 179

GLN 9 0.18 PRO 87 -0.12 GLY 178

GLN 9 0.19 TYR 88 -0.14 SER 205

GLN 9 0.20 GLU 89 -0.16 SER 205

GLY 180 0.27 GLY 90 -0.21 SER 205

GLY 180 0.29 VAL 91 -0.20 SER 205

GLN 142 0.31 GLN 92 -0.18 SER 205

LYS 139 0.28 ARG 93 -0.15 GLN 114

LYS 139 0.27 TYR 94 -0.12 GLN 114

ALA 137 0.28 CYS 95 -0.10 GLN 114

ALA 137 0.20 ARG 96 -0.06 SER 124

ASP 158 0.22 SER 97 -0.06 SER 124

ASP 158 0.23 ARG 98 -0.07 PRO 2

ALA 137 0.18 GLU 99 -0.06 PRO 15

ASP 158 0.14 LYS 100 -0.09 PRO 15

ASP 158 0.17 GLY 101 -0.13 PRO 15

ASP 158 0.20 PRO 102 -0.16 PRO 15

ASP 158 0.21 TYR 103 -0.14 ASN 184

ASP 158 0.17 ALA 104 -0.20 ASN 184

ASP 158 0.21 ALA 105 -0.18 ASN 184

ASP 158 0.27 LYS 106 -0.17 LYS 39

ASP 158 0.28 THR 107 -0.21 PRO 2

ASP 158 0.30 ASP 108 -0.26 PRO 2

ASP 158 0.34 GLY 109 -0.27 ILE 1

ASP 158 0.39 VAL 110 -0.25 ILE 1

LYS 156 0.30 ARG 111 -0.30 TRP 69

LYS 156 0.34 GLN 112 -0.27 TYR 67

ARG 41 0.22 VAL 113 -0.26 GLY 66

ARG 41 0.22 GLN 114 -0.30 GLY 66

GLN 112 0.20 PRO 115 -0.30 GLY 65

ARG 41 0.13 TYR 116 -0.22 GLY 23

ARG 41 0.12 ASN 117 -0.17 ASN 64

ILE 40 0.07 GLN 118 -0.10 CYS 22

ILE 40 0.10 GLY 119 -0.13 GLN 112

ILE 40 0.14 ALA 120 -0.20 GLN 112

ILE 40 0.11 LEU 121 -0.15 GLN 112

PRO 15 0.11 LEU 122 -0.16 ARG 111

ALA 12 0.13 TYR 123 -0.24 ARG 111

ILE 40 0.17 SER 124 -0.25 ARG 111

VAL 13 0.12 ILE 125 -0.20 VAL 210

PRO 15 0.14 ALA 126 -0.28 VAL 210

ILE 40 0.21 ASN 127 -0.30 VAL 210

GLY 36 0.17 GLN 128 -0.23 VAL 210

ASP 158 0.12 PRO 129 -0.16 GLY 165

ASP 158 0.17 VAL 130 -0.10 TRP 26

ASP 158 0.22 SER 131 -0.15 TRP 26

VAL 133 0.27 VAL 132 -0.16 CYS 22

TRP 69 0.43 VAL 133 -0.26 SER 21

TYR 67 0.41 LEU 134 -0.22 SER 21

TYR 67 0.54 GLN 135 -0.19 SER 21

GLY 65 0.61 ALA 136 -0.21 ASN 18

GLY 65 0.80 ALA 137 -0.19 ASN 18

GLY 65 0.64 GLY 138 -0.12 GLY 180

GLY 65 0.67 LYS 139 -0.15 GLY 180

GLY 65 0.55 ASP 140 -0.17 GLN 9

GLY 65 0.54 PHE 141 -0.15 GLY 11

GLY 65 0.67 GLN 142 -0.18 GLY 180

ASN 64 0.58 LEU 143 -0.18 GLY 11

GLY 65 0.47 TYR 144 -0.22 GLY 11

ASN 64 0.45 ARG 145 -0.29 GLY 11

ASN 64 0.35 GLY 146 -0.34 GLY 11

ASN 64 0.31 GLY 147 -0.34 GLN 9

GLY 65 0.27 ILE 148 -0.29 GLN 9

GLY 65 0.32 PHE 149 -0.22 GLN 9

GLY 65 0.27 VAL 150 -0.19 GLN 9

GLY 65 0.35 GLY 151 -0.17 GLN 9

GLY 65 0.37 PRO 152 -0.15 GLN 9

TYR 67 0.38 CYS 153 -0.13 GLN 9

TYR 67 0.40 GLY 154 -0.14 SER 21

TRP 69 0.39 ASN 155 -0.22 SER 21

TYR 67 0.53 LYS 156 -0.30 SER 21

TYR 67 0.59 VAL 157 -0.32 SER 21

TYR 67 0.90 ASP 158 -0.42 SER 21

TYR 67 0.70 HIS 159 -0.31 SER 21

PRO 68 0.42 ALA 160 -0.25 SER 21

ALA 160 0.29 VAL 161 -0.15 SER 176

ALA 160 0.16 ALA 162 -0.08 SER 205

ALA 160 0.13 ALA 163 -0.10 ARG 188

LYS 17 0.15 VAL 164 -0.18 ARG 188

PRO 15 0.18 GLY 165 -0.21 GLN 128

LYS 17 0.14 TYR 166 -0.17 ASN 212

TYR 186 0.18 GLY 167 -0.19 ASN 212

ASN 184 0.15 PRO 168 -0.17 ASN 212

ASN 184 0.12 ASN 169 -0.14 GLN 9

GLY 65 0.15 TYR 170 -0.19 GLN 9

GLY 65 0.12 ILE 171 -0.14 GLN 9

GLY 65 0.15 LEU 172 -0.19 ARG 188

GLY 65 0.17 ILE 173 -0.14 GLY 36

CYS 25 0.23 LYS 174 -0.14 GLY 36

CYS 25 0.32 ASN 175 -0.13 VAL 16

CYS 25 0.38 SER 176 -0.19 VAL 133

GLY 23 0.52 TRP 177 -0.25 LYS 17

GLY 20 0.45 GLY 178 -0.31 LYS 17

SER 21 0.40 THR 179 -0.34 PRO 15

SER 21 0.52 GLY 180 -0.24 PRO 15

GLY 23 0.48 TRP 181 -0.26 THR 14

ASN 64 0.38 GLY 182 -0.28 THR 14

GLY 23 0.32 GLU 183 -0.35 GLY 11

SER 21 0.33 ASN 184 -0.40 THR 14

GLY 23 0.35 GLY 185 -0.33 THR 14

GLY 23 0.26 TYR 186 -0.27 THR 14

GLY 65 0.30 ILE 187 -0.26 GLY 11

GLY 65 0.23 ARG 188 -0.27 GLN 9

GLY 65 0.23 ILE 189 -0.18 GLN 9

GLY 65 0.16 LYS 190 -0.17 GLN 9

TYR 67 0.08 ARG 191 -0.10 VAL 199

GLU 183 0.07 GLY 192 -0.09 GLY 154

ILE 148 0.09 THR 193 -0.11 GLY 154

ILE 148 0.07 GLY 194 -0.10 ASN 155

VAL 150 0.10 ASN 195 -0.11 SER 21

VAL 110 0.09 SER 196 -0.16 SER 21

VAL 110 0.15 TYR 197 -0.21 SER 21

TRP 69 0.14 GLY 198 -0.12 SER 21

TYR 67 0.22 VAL 199 -0.11 GLN 9

TYR 67 0.33 CYS 200 -0.13 ASN 18

TRP 69 0.29 GLY 201 -0.21 SER 21

TRP 69 0.22 LEU 202 -0.16 SER 21

GLN 112 0.15 TYR 203 -0.20 SER 21

SER 205 0.32 THR 204 -0.30 GLY 23

LYS 156 0.34 SER 205 -0.33 GLY 23

LYS 156 0.25 SER 206 -0.26 TRP 26

ASP 158 0.33 PHE 207 -0.23 SER 124

ASP 158 0.28 TYR 208 -0.24 TRP 69

ASP 158 0.32 PRO 209 -0.22 PRO 2

ASP 158 0.27 VAL 210 -0.30 PRO 2

ARG 111 0.24 LYS 211 -0.29 PRO 2

ASP 158 0.21 ASN 212 -0.32 PRO 2

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** HYDROLASE (SULFHYDRYL PROTEINASE) 01-NOV-76 2PAD ***

CA distance fluctuations for 240110231412668287

--- normal mode 8 ---

Should you encounter any unexpected behaviour,
please let us know.

* HYDROLASE (SULFHYDRYL PROTEINASE) 01-NOV-76 2PAD *