CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  EXP_5JHW_unrelaxed_rank_001_alphafold2_ptm_model_5_seed_000  ***

CA distance fluctuations for 24021912411639070

---  normal mode 12  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
GLU 4 0.77 LYS 1 -0.21 SER 27
GLU 22 0.86 SER 2 -0.37 HIS 35
LYS 1 0.66 ASP 3 -0.34 SER 27
LYS 1 0.77 GLU 4 -0.42 SER 27
LYS 1 0.54 PRO 5 -0.62 SER 27
LYS 1 0.36 VAL 6 -0.40 SER 27
LYS 1 0.27 CYS 7 -0.37 SER 27
SER 2 0.20 ALA 8 -0.33 LYS 21
ALA 23 0.31 SER 9 -0.35 LYS 21
ALA 23 0.48 ASP 10 -0.63 LEU 30
SER 2 0.43 ASN 11 -0.59 LEU 30
SER 2 0.62 ALA 12 -0.77 VAL 29
SER 2 0.58 THR 13 -0.79 SER 27
SER 2 0.58 TYR 14 -0.75 SER 27
SER 2 0.64 ALA 15 -0.86 SER 27
LEU 30 0.39 SER 16 -0.46 SER 27
LEU 30 0.70 GLU 17 -0.39 LYS 34
CYS 25 0.69 CYS 18 -0.67 GLU 32
SER 2 0.76 ALA 19 -0.80 ALA 23
SER 2 0.48 MET 20 -0.57 GLU 32
CYS 18 0.52 LYS 21 -1.28 GLU 32
SER 2 0.86 GLU 22 -0.88 GLU 32
ASP 10 0.48 ALA 23 -0.80 ALA 19
SER 2 0.45 ALA 24 -0.40 THR 13
CYS 18 0.69 CYS 25 -0.59 LEU 31
SER 2 0.47 SER 26 -0.43 ALA 15
VAL 29 0.19 SER 27 -0.86 ALA 15
SER 2 0.32 GLY 28 -0.62 ASN 40
GLU 17 0.33 VAL 29 -0.77 ALA 12
GLU 17 0.70 LEU 30 -0.63 ALA 12
VAL 33 0.49 LEU 31 -0.59 CYS 25
VAL 33 0.57 GLU 32 -1.28 LYS 21
GLU 32 0.57 VAL 33 -0.53 CYS 18
GLU 32 0.51 LYS 34 -0.48 CYS 18
GLU 32 0.54 HIS 35 -0.38 CYS 18
LEU 30 0.52 SER 36 -0.34 SER 2
LYS 1 0.49 GLY 37 -0.45 SER 27
LYS 1 0.50 SER 38 -0.66 SER 27
LYS 1 0.35 CYS 39 -0.56 VAL 29
LYS 1 0.43 ASN 40 -0.68 VAL 29

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.