Should you encounter any unexpected behaviour,
please let us know.

* EXP_2VIU_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000 *

CA distance fluctuations for 24021912441443086

--- normal mode 12 ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok

largest increase ref largest decrease
GLU 30 0.22 GLY 1 -0.06 ARG 25

PHE 70 0.19 LEU 2 -0.04 ARG 25

PHE 70 0.15 PHE 3 -0.07 ARG 25

PHE 70 0.16 GLY 4 -0.07 ARG 25

ILE 66 0.18 ALA 5 -0.03 ASN 135

ILE 66 0.14 ILE 6 -0.04 ASN 135

ILE 66 0.11 ALA 7 -0.08 HIS 26

ILE 66 0.14 GLY 8 -0.06 HIS 26

ILE 66 0.14 PHE 9 -0.05 ASN 135

ILE 66 0.08 ILE 10 -0.07 HIS 26

ILE 66 0.08 GLU 11 -0.08 SER 29

ILE 66 0.11 ASN 12 -0.06 ASN 135

ILE 66 0.14 GLY 13 -0.06 ASN 135

ILE 66 0.22 TRP 14 -0.05 ASN 135

ILE 66 0.22 GLU 15 -0.04 ASN 135

ILE 66 0.17 GLY 16 -0.04 ASN 135

ILE 66 0.20 MET 17 -0.04 ASN 135

ILE 66 0.25 ILE 18 -0.03 ASN 135

ILE 66 0.21 ASP 19 -0.03 ASN 135

PHE 70 0.18 GLY 20 -0.03 ASN 135

PHE 70 0.22 TRP 21 -0.02 ASN 135

PHE 70 0.23 TYR 22 -0.01 GLU 11

PHE 70 0.19 GLY 23 -0.03 GLY 4

VAL 73 0.18 PHE 24 -0.04 GLY 4

VAL 73 0.20 ARG 25 -0.10 ALA 35

VAL 73 0.16 HIS 26 -0.09 ALA 35

ILE 77 0.17 GLN 27 -0.08 GLU 11

ILE 77 0.18 ASN 28 -0.06 GLU 11

ILE 77 0.14 SER 29 -0.08 GLU 11

GLY 1 0.22 GLU 30 -0.03 GLU 11

GLY 1 0.15 GLY 31 -0.07 GLU 11

GLY 1 0.14 THR 32 -0.04 ASN 28

GLY 1 0.14 GLY 33 -0.09 HIS 26

PHE 70 0.09 GLN 34 -0.06 HIS 26

PHE 70 0.10 ALA 35 -0.10 ARG 25

PHE 70 0.08 ALA 36 -0.07 ARG 25

PHE 70 0.05 ASP 37 -0.05 ASN 135

ALA 35 0.04 LEU 38 -0.06 ASN 135

GLU 11 0.03 LYS 39 -0.07 ASN 135

GLU 11 0.04 SER 40 -0.06 ASN 135

ILE 66 0.06 THR 41 -0.06 ASN 135

GLU 30 0.03 GLN 42 -0.07 ASN 135

GLU 11 0.02 ALA 43 -0.07 ASN 135

THR 59 0.05 ALA 44 -0.06 ASN 135

THR 59 0.06 ILE 45 -0.06 ASN 135

GLU 30 0.02 ASP 46 -0.07 ASN 135

THR 59 0.02 GLN 47 -0.07 ASN 135

THR 59 0.07 ILE 48 -0.07 ASN 135

GLU 30 0.04 ASN 49 -0.07 ASN 135

ASN 49 0.02 GLY 50 -0.08 GLU 57

LEU 2 0.04 LYS 51 -0.08 ASN 135

LEU 2 0.09 LEU 52 -0.08 ASN 135

LEU 2 0.05 ASN 53 -0.08 ASN 135

TRP 14 0.07 ARG 54 -0.08 ASN 135

TRP 14 0.15 VAL 55 -0.08 ASN 135

ILE 18 0.12 ILE 56 -0.08 ASN 135

TRP 14 0.10 GLU 57 -0.08 GLY 50

TRP 14 0.16 LYS 58 -0.08 ASN 135

TRP 14 0.21 THR 59 -0.09 ASN 135

ILE 18 0.16 ASN 60 -0.08 ASN 135

TRP 14 0.15 GLU 61 -0.07 ASN 135

ILE 18 0.22 LYS 62 -0.09 ASN 135

ILE 18 0.22 PHE 63 -0.09 ASN 135

ILE 18 0.18 HIS 64 -0.07 ASN 135

ILE 18 0.20 GLN 65 -0.08 ASN 135

ILE 18 0.25 ILE 66 -0.10 ASN 135

ILE 18 0.21 GLU 67 -0.09 ASN 135

ILE 18 0.19 LYS 68 -0.07 ILE 173

ILE 18 0.23 GLU 69 -0.10 ASN 135

ILE 18 0.24 PHE 70 -0.11 ASN 135

ILE 18 0.21 SER 71 -0.08 ASN 135

ILE 18 0.21 GLU 72 -0.08 ASN 135

TYR 22 0.23 VAL 73 -0.11 ASN 135

TYR 22 0.22 GLU 74 -0.11 ASN 135

TYR 22 0.21 GLY 75 -0.09 ASN 135

TYR 22 0.21 ARG 76 -0.11 ASN 135

TYR 22 0.21 ILE 77 -0.12 ASN 135

TYR 22 0.20 GLN 78 -0.11 ASN 135

TYR 22 0.20 ASP 79 -0.11 ASN 135

TYR 22 0.19 LEU 80 -0.13 ASN 135

TYR 22 0.19 GLU 81 -0.13 ASN 135

TYR 22 0.18 LYS 82 -0.12 ASN 135

TYR 22 0.18 TYR 83 -0.13 ASN 135

TYR 22 0.16 VAL 84 -0.14 ASN 135

TYR 22 0.16 GLU 85 -0.14 ASN 135

TYR 22 0.16 ASP 86 -0.14 ASN 135

ARG 25 0.15 THR 87 -0.16 ASN 135

ASN 28 0.14 LYS 88 -0.15 ASN 135

ASN 28 0.14 ILE 89 -0.16 ASN 135

ARG 25 0.13 ASP 90 -0.17 ASN 135

ASN 28 0.12 LEU 91 -0.17 ASN 135

ASN 28 0.12 TRP 92 -0.17 ASN 135

ASN 28 0.12 SER 93 -0.19 ASN 135

ASN 28 0.11 TYR 94 -0.19 ASN 135

ASN 28 0.10 ASN 95 -0.17 ASN 135

ASN 28 0.10 ALA 96 -0.19 ASN 135

ASN 28 0.10 GLU 97 -0.22 ASN 135

ASN 28 0.09 LEU 98 -0.21 ASN 135

ASN 28 0.08 LEU 99 -0.18 ASN 135

ASN 28 0.09 VAL 100 -0.22 ASN 135

ASN 28 0.08 ALA 101 -0.25 ASN 135

ASN 28 0.07 LEU 102 -0.20 ASN 135

ASN 28 0.07 GLU 103 -0.19 ASN 135

ASN 28 0.07 ASN 104 -0.25 ASN 135

ASN 28 0.07 GLN 105 -0.25 ASN 135

LYS 117 0.06 HIS 106 -0.19 ASN 135

ASN 28 0.06 THR 107 -0.20 ASN 135

ASN 28 0.06 ILE 108 -0.27 ASN 135

ASN 28 0.06 ASP 109 -0.21 ASN 135

LYS 117 0.07 LEU 110 -0.15 ASN 135

ASN 28 0.06 THR 111 -0.17 ASN 135

ASN 28 0.05 ASP 112 -0.22 ASN 135

LYS 117 0.06 SER 113 -0.12 ASN 135

ASN 28 0.06 GLU 114 -0.07 ASN 135

ASN 28 0.05 MET 115 -0.10 GLY 136

ASN 28 0.05 ASN 116 -0.07 GLY 136

LEU 110 0.07 LYS 117 -0.04 THR 59

ASN 28 0.06 LEU 118 -0.04 THR 59

ASN 28 0.05 PHE 119 -0.08 ILE 108

ASN 28 0.06 GLU 120 -0.04 THR 59

LYS 117 0.07 LYS 121 -0.03 THR 59

ASN 28 0.06 THR 122 -0.06 ILE 108

ASN 28 0.06 ARG 123 -0.06 ILE 108

ASN 28 0.07 ARG 124 -0.03 THR 59

ASN 28 0.07 GLN 125 -0.03 ILE 108

ASN 28 0.06 LEU 126 -0.06 ILE 108

ASN 28 0.06 ARG 127 -0.05 ILE 108

ASN 28 0.06 GLU 128 -0.06 ASN 104

ASN 28 0.05 ASN 129 -0.08 ASN 104

ASN 28 0.04 ALA 130 -0.10 ASN 104

ASN 28 0.04 GLU 131 -0.12 GLU 97

ASN 28 0.03 GLU 132 -0.13 ALA 101

ASN 28 0.02 MET 133 -0.18 ALA 101

ASN 28 0.02 GLY 134 -0.20 ALA 101

ARG 153 0.02 ASN 135 -0.27 ILE 108

ASN 28 0.03 GLY 136 -0.22 ILE 108

ARG 153 0.03 CYS 137 -0.21 ILE 108

ASN 28 0.03 PHE 138 -0.16 ASN 104

ASN 28 0.02 LYS 139 -0.16 GLU 97

ASN 28 0.03 ILE 140 -0.14 GLU 97

ASN 28 0.03 TYR 141 -0.13 GLU 97

ASN 28 0.04 HIS 142 -0.12 GLU 97

ASN 28 0.03 LYS 143 -0.13 GLU 97

ASN 28 0.03 CYS 144 -0.13 GLU 97

ASN 28 0.03 ASP 145 -0.14 GLU 97

ASN 28 0.03 ASN 146 -0.14 GLU 97

ASN 28 0.04 ALA 147 -0.10 ASN 104

ASN 28 0.04 CYS 148 -0.10 ASN 104

ASN 28 0.04 ILE 149 -0.13 ASN 104

ASN 28 0.05 GLU 150 -0.10 ASN 104

ASN 28 0.06 SER 151 -0.07 ASN 104

ASN 28 0.05 ILE 152 -0.08 ASN 104

ASN 28 0.05 ARG 153 -0.08 ASN 104

ASN 28 0.06 ASN 154 -0.04 ASN 104

ASN 28 0.07 GLY 155 -0.03 THR 59

ASN 28 0.07 THR 156 -0.03 THR 59

ASN 28 0.07 TYR 157 -0.04 ASN 104

ASN 28 0.07 ASP 158 -0.03 ILE 108

ASN 28 0.07 HIS 159 -0.04 ILE 108

ASN 28 0.07 ASP 160 -0.03 ILE 108

ASN 28 0.06 VAL 161 -0.05 ASN 104

ASN 28 0.05 TYR 162 -0.07 GLU 97

ASN 28 0.06 ARG 163 -0.06 ASN 104

ASN 28 0.05 ASP 164 -0.07 GLU 97

ASN 28 0.04 GLU 165 -0.09 GLU 97

ASN 28 0.04 ALA 166 -0.09 GLU 97

ASN 28 0.05 LEU 167 -0.08 GLU 97

ASN 28 0.04 ASN 168 -0.10 GLU 97

ASN 28 0.03 ASN 169 -0.12 GLU 97

ASN 28 0.03 ARG 170 -0.11 GLU 97

ASN 28 0.03 PHE 171 -0.11 GLU 97

ASN 28 0.02 GLN 172 -0.13 GLU 97

ASN 28 0.02 ILE 173 -0.14 GLU 97

ASN 28 0.02 LYS 174 -0.13 GLU 97

ASN 28 0.02 GLY 175 -0.13 GLU 97

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** EXP_2VIU_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000 ***

CA distance fluctuations for 24021912441443086

--- normal mode 12 ---

Should you encounter any unexpected behaviour,
please let us know.

* EXP_2VIU_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000 *