Should you encounter any unexpected behaviour,
please let us know.

* EXP_1QNX_unrelaxed_rank_001_alphafold2_ptm_model_1_seed_000 *

CA distance fluctuations for 24021912510351363

--- normal mode 12 ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok

largest increase ref largest decrease
GLY 25 0.22 ALA 1 -1.31 ASP 86

ASN 6 0.36 GLU 2 -1.04 LEU 27

ASN 7 0.32 ALA 3 -0.56 LEU 27

PHE 5 0.26 GLU 4 -0.42 LYS 43

GLU 4 0.26 PHE 5 -0.45 LEU 27

GLU 2 0.36 ASN 6 -0.36 LYS 43

ALA 3 0.32 ASN 7 -0.28 GLY 32

GLY 17 0.17 TYR 8 -0.31 GLY 32

GLY 17 0.33 CYS 9 -0.43 GLY 32

GLY 16 0.33 LYS 10 -0.38 GLY 32

TYR 112 0.28 ILE 11 -0.38 GLY 32

TYR 112 0.32 LYS 12 -0.46 GLY 32

LYS 10 0.32 CYS 13 -0.39 GLU 183

ASN 169 0.32 LEU 14 -0.41 GLU 183

SER 197 0.31 LYS 15 -0.47 GLU 183

LYS 10 0.33 GLY 16 -0.50 GLU 183

CYS 9 0.33 GLY 17 -0.58 GLY 32

ASN 6 0.31 VAL 18 -0.53 GLY 32

ASN 6 0.21 HIS 19 -0.41 GLY 32

LYS 23 0.21 THR 20 -0.40 GLY 32

LYS 23 0.14 ALA 21 -0.33 GLY 32

ASN 6 0.15 CYS 22 -0.41 GLY 32

ASP 104 0.22 LYS 23 -0.49 GLY 32

ALA 1 0.14 TYR 24 -0.46 CYS 31

ALA 1 0.22 GLY 25 -0.36 CYS 9

TYR 90 0.10 SER 26 -0.74 GLU 2

ALA 89 0.14 LEU 27 -1.04 GLU 2

ALA 89 0.12 LYS 28 -0.90 GLU 2

GLY 32 0.13 PRO 29 -0.74 GLU 2

GLN 100 0.12 ASN 30 -0.55 GLU 2

TYR 39 0.22 CYS 31 -0.52 GLU 2

TYR 39 0.20 GLY 32 -0.58 GLY 17

THR 42 0.27 ASN 33 -0.55 GLY 17

THR 42 0.32 LYS 34 -0.47 GLU 2

THR 42 0.36 VAL 35 -0.57 GLU 2

THR 42 0.41 VAL 36 -0.66 GLU 2

THR 42 0.53 VAL 37 -0.73 GLU 2

THR 42 0.63 SER 38 -0.82 GLU 2

VAL 36 0.27 TYR 39 -0.89 GLU 2

ALA 89 0.22 GLY 40 -0.98 GLU 2

SER 38 0.53 LEU 41 -0.95 GLU 2

SER 38 0.63 THR 42 -1.00 ALA 1

SER 38 0.50 LYS 43 -1.17 ALA 1

LYS 127 0.46 GLN 44 -0.97 ALA 1

SER 38 0.40 GLU 45 -0.87 ALA 1

SER 38 0.34 LYS 46 -0.99 ALA 1

SER 38 0.34 GLN 47 -0.92 ALA 1

TYR 128 0.37 ASP 48 -0.79 ALA 1

TYR 128 0.33 ILE 49 -0.77 ALA 1

TYR 128 0.26 LEU 50 -0.79 ALA 1

LYS 127 0.29 LYS 51 -0.71 ALA 1

TYR 128 0.33 GLU 52 -0.65 ALA 1

TYR 128 0.28 HIS 53 -0.64 ALA 1

TYR 128 0.25 ASN 54 -0.63 ALA 1

LYS 127 0.29 ASP 55 -0.57 ALA 1

LYS 127 0.29 PHE 56 -0.53 ALA 1

TYR 128 0.25 ARG 57 -0.53 ALA 1

LYS 127 0.25 GLN 58 -0.51 ALA 1

LYS 127 0.28 LYS 59 -0.46 ALA 1

LYS 127 0.27 ILE 60 -0.45 ALA 1

LYS 127 0.23 ALA 61 -0.45 ALA 1

ALA 125 0.24 ARG 62 -0.42 ALA 1

ALA 125 0.26 GLY 63 -0.40 ALA 1

ALA 125 0.30 LEU 64 -0.40 ALA 1

ALA 125 0.33 GLU 65 -0.40 ALA 1

ALA 125 0.35 THR 66 -0.37 ALA 1

ALA 125 0.36 ARG 67 -0.37 ALA 1

ALA 125 0.32 GLY 68 -0.37 ALA 1

ALA 125 0.31 ASN 69 -0.35 ALA 1

ALA 125 0.30 PRO 70 -0.33 ALA 1

ALA 125 0.31 GLY 71 -0.35 ALA 1

ALA 125 0.31 PRO 72 -0.36 ALA 1

ALA 125 0.28 GLN 73 -0.39 ALA 1

ALA 125 0.25 PRO 74 -0.38 ALA 1

ALA 125 0.23 PRO 75 -0.40 ALA 1

ALA 125 0.21 ALA 76 -0.42 ALA 1

LYS 12 0.23 LYS 77 -0.41 ALA 1

LYS 12 0.27 ASN 78 -0.45 ALA 1

LYS 12 0.23 MET 79 -0.50 ALA 1

LYS 12 0.23 LYS 80 -0.56 ALA 1

LYS 127 0.19 ASN 81 -0.63 ALA 1

GLU 172 0.21 LEU 82 -0.70 ALA 1

SER 38 0.20 VAL 83 -0.82 ALA 1

SER 38 0.23 TRP 84 -0.98 ALA 1

SER 38 0.19 ASN 85 -1.03 ALA 1

GLY 40 0.19 ASP 86 -1.31 ALA 1

GLY 40 0.12 GLU 87 -0.97 ALA 1

GLY 40 0.13 LEU 88 -0.82 ALA 1

GLY 40 0.22 ALA 89 -0.95 ALA 1

GLY 25 0.12 TYR 90 -0.91 ALA 1

LYS 23 0.12 VAL 91 -0.60 ALA 1

LYS 23 0.11 ALA 92 -0.63 ALA 1

ALA 89 0.17 GLN 93 -0.78 GLU 2

ALA 89 0.11 VAL 94 -0.67 GLU 2

GLY 102 0.07 TRP 95 -0.49 GLU 2

GLY 102 0.07 ALA 96 -0.61 GLU 2

ALA 89 0.09 ASN 97 -0.67 GLU 2

ASN 30 0.09 GLN 98 -0.48 GLU 2

THR 42 0.12 CYS 99 -0.51 GLU 2

ASN 30 0.12 GLN 100 -0.49 GLU 183

ASN 30 0.09 TYR 101 -0.50 GLU 183

LYS 23 0.14 GLY 102 -0.45 GLU 183

LYS 23 0.16 HIS 103 -0.43 GLU 183

LYS 23 0.22 ASP 104 -0.44 GLU 183

ASN 169 0.17 THR 105 -0.51 GLU 183

CYS 9 0.20 CYS 106 -0.41 GLU 183

CYS 9 0.14 ARG 107 -0.32 ALA 1

GLY 195 0.22 ASP 108 -0.32 ALA 1

ILE 11 0.16 VAL 109 -0.38 ALA 1

ALA 3 0.23 ALA 110 -0.26 ALA 1

LYS 12 0.23 LYS 111 -0.38 ALA 1

LYS 12 0.32 TYR 112 -0.38 ALA 1

PRO 196 0.35 GLN 113 -0.35 ALA 1

GLY 195 0.22 VAL 114 -0.46 ALA 1

LYS 15 0.20 GLY 115 -0.47 ALA 1

THR 105 0.11 GLN 116 -0.49 ALA 1

TYR 128 0.13 ASN 117 -0.51 ALA 1

LYS 201 0.11 VAL 118 -0.46 ALA 1

LYS 201 0.15 ALA 119 -0.46 ALA 1

LEU 157 0.14 LEU 120 -0.46 GLU 2

LYS 158 0.24 THR 121 -0.48 GLU 2

LYS 158 0.19 GLY 122 -0.49 GLU 2

ASP 129 0.31 SER 123 -0.49 GLU 2

GLN 44 0.30 THR 124 -0.49 GLU 2

GLN 44 0.38 ALA 125 -0.52 GLU 2

GLN 44 0.45 ALA 126 -0.60 GLU 2

GLN 44 0.46 LYS 127 -0.59 GLU 2

ASP 130 0.57 TYR 128 -0.61 GLU 2

TYR 128 0.50 ASP 129 -0.60 GLU 2

TYR 128 0.57 ASP 130 -0.65 GLU 2

TYR 128 0.43 PRO 131 -0.65 ALA 1

TYR 128 0.42 VAL 132 -0.64 ALA 1

TYR 128 0.43 LYS 133 -0.55 ALA 1

TYR 128 0.31 LEU 134 -0.54 ALA 1

TYR 128 0.34 VAL 135 -0.58 ALA 1

TYR 128 0.37 LYS 136 -0.52 ALA 1

ASP 129 0.37 MET 137 -0.47 ALA 1

TYR 128 0.27 TRP 138 -0.48 ALA 1

TYR 128 0.33 GLU 139 -0.49 ALA 1

LYS 133 0.40 ASP 140 -0.44 ALA 1

LYS 133 0.35 GLU 141 -0.42 ALA 1

LYS 133 0.32 VAL 142 -0.42 ALA 1

ALA 125 0.36 LYS 143 -0.38 ALA 1

ALA 125 0.31 ASP 144 -0.37 ALA 1

ASP 129 0.28 TYR 145 -0.38 ALA 1

ALA 125 0.26 ASN 146 -0.36 ALA 1

ALA 125 0.25 PRO 147 -0.37 ALA 1

ALA 125 0.24 LYS 148 -0.34 ALA 1

ALA 125 0.23 LYS 149 -0.33 ALA 1

ALA 125 0.21 LYS 150 -0.34 ALA 1

ASP 129 0.22 PHE 151 -0.35 ALA 1

ASP 129 0.21 SER 152 -0.33 ALA 1

ASP 129 0.20 GLY 153 -0.36 ALA 1

ASP 129 0.21 ASN 154 -0.33 ALA 1

ASP 129 0.25 ASP 155 -0.35 ALA 1

ASP 129 0.23 PHE 156 -0.38 ALA 1

ASP 129 0.25 LEU 157 -0.37 ALA 1

ASP 129 0.30 LYS 158 -0.37 ALA 1

ASP 129 0.28 THR 159 -0.40 ALA 1

ASP 129 0.22 GLY 160 -0.44 ALA 1

TYR 128 0.21 HIS 161 -0.47 ALA 1

TYR 128 0.26 TYR 162 -0.47 ALA 1

TYR 128 0.23 THR 163 -0.45 ALA 1

TYR 128 0.21 GLN 164 -0.50 ALA 1

TYR 128 0.24 MET 165 -0.55 ALA 1

TYR 128 0.23 VAL 166 -0.51 ALA 1

LYS 15 0.21 TRP 167 -0.50 ALA 1

LEU 14 0.25 ALA 168 -0.49 ALA 1

LEU 14 0.32 ASN 169 -0.50 ALA 1

LYS 12 0.27 THR 170 -0.58 ALA 1

LYS 12 0.24 LYS 171 -0.65 ALA 1

LEU 82 0.21 GLU 172 -0.77 ALA 1

SER 38 0.18 VAL 173 -0.80 ALA 1

GLY 40 0.20 GLY 174 -0.91 ALA 1

GLY 40 0.20 CYS 175 -0.83 ALA 1

GLY 40 0.20 GLY 176 -0.76 ALA 1

SER 38 0.13 SER 177 -0.76 GLU 2

LYS 34 0.20 ILE 178 -0.75 GLU 2

THR 42 0.37 LYS 179 -0.71 GLU 2

THR 42 0.31 TYR 180 -0.64 GLU 2

THR 42 0.35 ILE 181 -0.55 GLU 2

THR 42 0.24 GLN 182 -0.49 GLU 2

GLN 44 0.26 GLU 183 -0.55 GLY 17

GLN 44 0.37 LYS 184 -0.46 GLU 2

GLN 44 0.27 TRP 185 -0.50 GLU 2

GLN 44 0.35 HIS 186 -0.56 GLU 2

GLN 44 0.22 LYS 187 -0.57 GLU 2

GLN 44 0.21 HIS 188 -0.61 GLU 2

CYS 31 0.11 TYR 189 -0.57 GLU 2

SER 38 0.13 LEU 190 -0.59 GLU 2

SER 177 0.13 VAL 191 -0.58 ALA 1

SER 38 0.14 CYS 192 -0.67 ALA 1

GLY 40 0.12 ASN 193 -0.65 ALA 1

ASP 108 0.17 TYR 194 -0.64 ALA 1

GLN 113 0.24 GLY 195 -0.62 ALA 1

GLN 113 0.35 PRO 196 -0.53 ALA 1

LYS 15 0.31 SER 197 -0.49 ALA 1

LYS 15 0.28 GLY 198 -0.46 ALA 1

LYS 15 0.19 ASN 199 -0.41 ALA 1

LYS 15 0.30 PHE 200 -0.37 ALA 1

ASP 129 0.18 LYS 201 -0.34 TYR 112

ASP 129 0.17 ASN 202 -0.33 ALA 1

LYS 15 0.24 GLU 203 -0.37 ALA 1

LYS 15 0.20 GLU 204 -0.39 ALA 1

TYR 128 0.20 LEU 205 -0.43 ALA 1

LYS 15 0.20 TYR 206 -0.43 ALA 1

LYS 12 0.22 GLN 207 -0.39 ALA 1

ALA 125 0.21 THR 208 -0.38 ALA 1

ALA 125 0.20 LYS 209 -0.36 ALA 1

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** EXP_1QNX_unrelaxed_rank_001_alphafold2_ptm_model_1_seed_000 ***

CA distance fluctuations for 24021912510351363

--- normal mode 12 ---

Should you encounter any unexpected behaviour,
please let us know.

* EXP_1QNX_unrelaxed_rank_001_alphafold2_ptm_model_1_seed_000 *