CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1AOL_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA distance fluctuations for 240220085659142820

---  normal mode 15  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ARG 120 0.46 GLN 1 -0.20 VAL 227
PRO 25 0.44 VAL 2 -0.13 ASN 23
ARG 120 0.38 TYR 3 -0.13 TRP 18
VAL 227 0.53 ASN 4 -0.19 TRP 18
VAL 227 0.43 ILE 5 -0.16 GLN 221
VAL 227 0.44 THR 6 -0.26 GLN 221
VAL 227 0.37 TRP 7 -0.23 GLN 221
VAL 227 0.33 GLU 8 -0.26 GLN 221
VAL 227 0.29 VAL 9 -0.23 GLN 221
VAL 227 0.24 THR 10 -0.22 GLN 221
VAL 227 0.22 ASN 11 -0.20 GLN 221
VAL 227 0.18 GLY 12 -0.16 PRO 128
VAL 227 0.16 ASP 13 -0.20 GLY 224
VAL 227 0.18 ARG 14 -0.21 GLY 224
VAL 227 0.21 GLU 15 -0.27 GLN 221
VAL 227 0.27 THR 16 -0.30 GLN 221
VAL 227 0.29 VAL 17 -0.29 GLN 221
VAL 227 0.35 TRP 18 -0.30 GLN 221
VAL 227 0.41 ALA 19 -0.29 GLN 221
VAL 227 0.50 ILE 20 -0.30 SER 21
VAL 227 0.60 SER 21 -0.30 ILE 20
VAL 227 0.68 GLY 22 -0.21 ASN 160
VAL 227 0.66 ASN 23 -0.16 LEU 161
ARG 226 0.49 HIS 24 -0.09 SER 69
ARG 226 0.45 PRO 25 -0.08 SER 69
ARG 120 0.46 LEU 26 -0.07 GLY 70
ARG 120 0.43 TRP 27 -0.07 TRP 29
ARG 226 0.44 THR 28 -0.09 TRP 29
ARG 226 0.42 TRP 29 -0.10 LYS 147
VAL 227 0.36 TRP 30 -0.12 LYS 147
VAL 227 0.42 PRO 31 -0.15 LYS 147
VAL 227 0.38 VAL 32 -0.20 ASP 158
VAL 227 0.36 LEU 33 -0.20 SER 21
VAL 227 0.34 THR 34 -0.25 SER 21
VAL 227 0.32 PRO 35 -0.23 GLN 221
VAL 227 0.30 ASP 36 -0.22 GLN 221
VAL 227 0.26 LEU 37 -0.19 GLN 221
VAL 227 0.26 CYS 38 -0.20 GLN 221
VAL 227 0.28 MET 39 -0.23 GLN 221
VAL 227 0.25 LEU 40 -0.20 GLN 221
VAL 227 0.23 ALA 41 -0.23 ASP 129
VAL 227 0.24 LEU 42 -0.22 GLN 221
VAL 227 0.21 SER 43 -0.26 ASP 129
VAL 227 0.19 GLY 44 -0.35 ASP 129
VAL 227 0.18 PRO 45 -0.50 ASP 129
VAL 227 0.19 PRO 46 -0.43 ASP 129
VAL 227 0.19 HIS 47 -0.39 ASP 129
VAL 227 0.21 TRP 48 -0.32 ASP 129
VAL 227 0.21 GLY 49 -0.33 ASP 129
VAL 227 0.23 LEU 50 -0.29 ASP 129
VAL 227 0.20 GLU 51 -0.34 ASP 129
VAL 227 0.21 TYR 52 -0.28 ASP 129
VAL 227 0.24 GLN 53 -0.24 GLY 224
VAL 227 0.24 ALA 54 -0.27 GLY 224
VAL 227 0.27 PRO 55 -0.29 GLN 221
VAL 227 0.32 TYR 56 -0.28 GLN 221
VAL 227 0.31 SER 57 -0.25 GLN 221
VAL 227 0.34 SER 58 -0.21 GLN 221
VAL 227 0.32 PRO 59 -0.20 GLN 221
VAL 227 0.29 PRO 60 -0.22 ASP 129
VAL 227 0.29 GLY 61 -0.24 ASP 129
VAL 227 0.32 PRO 62 -0.36 GLY 70
VAL 227 0.30 PRO 63 -0.44 GLY 70
VAL 227 0.28 CYS 64 -0.49 GLY 70
VAL 227 0.24 CYS 65 -0.36 SER 68
VAL 227 0.24 SER 66 -0.26 ASP 129
VAL 227 0.23 GLY 67 -0.20 ASP 129
VAL 227 0.19 SER 68 -0.37 CYS 64
ALA 73 0.36 SER 69 -0.47 LYS 171
ALA 73 0.38 GLY 70 -0.49 CYS 64
VAL 227 0.27 SER 71 -0.25 ASP 129
VAL 227 0.30 SER 72 -0.28 ASP 129
GLY 70 0.38 ALA 73 -0.34 ASP 129
SER 69 0.28 GLY 74 -0.35 ASP 129
VAL 227 0.26 CYS 75 -0.29 ASP 129
VAL 227 0.25 SER 76 -0.30 THR 87
SER 69 0.29 ARG 77 -0.29 LEU 86
VAL 227 0.22 ASP 78 -0.28 SER 135
VAL 227 0.23 CYS 79 -0.29 SER 68
VAL 227 0.21 ASP 80 -0.29 SER 68
VAL 227 0.21 GLU 81 -0.23 SER 135
VAL 227 0.19 PRO 82 -0.24 SER 135
VAL 227 0.19 LEU 83 -0.24 SER 135
VAL 227 0.18 THR 84 -0.30 SER 135
VAL 227 0.18 SER 85 -0.35 SER 135
VAL 227 0.18 LEU 86 -0.33 ALA 134
VAL 227 0.20 THR 87 -0.30 SER 76
VAL 227 0.20 PRO 88 -0.26 ALA 134
VAL 227 0.22 ARG 89 -0.29 ASP 129
VAL 227 0.25 CYS 90 -0.24 ASP 129
VAL 227 0.25 ASN 91 -0.28 ASP 129
VAL 227 0.27 THR 92 -0.24 ASP 129
VAL 227 0.28 ALA 93 -0.25 GLY 70
VAL 227 0.26 TRP 94 -0.27 SER 68
VAL 227 0.24 ASN 95 -0.21 ASP 129
VAL 227 0.26 ARG 96 -0.19 SER 68
VAL 227 0.25 LEU 97 -0.26 SER 69
VAL 227 0.23 LYS 98 -0.23 SER 68
VAL 227 0.23 LEU 99 -0.19 SER 68
VAL 227 0.23 ASP 100 -0.20 SER 69
VAL 227 0.22 GLN 101 -0.23 SER 69
VAL 227 0.20 VAL 102 -0.18 SER 68
VAL 227 0.21 THR 103 -0.16 SER 21
VAL 227 0.20 HIS 104 -0.19 SER 69
VAL 227 0.18 LYS 105 -0.17 SER 69
VAL 227 0.16 SER 106 -0.16 SER 21
VAL 227 0.16 SER 107 -0.19 GLU 121
VAL 227 0.17 GLU 108 -0.20 GLU 121
VAL 227 0.19 GLY 109 -0.17 GLU 121
VAL 227 0.19 PHE 110 -0.17 GLU 121
VAL 227 0.18 TYR 111 -0.20 GLU 121
VAL 227 0.19 VAL 112 -0.16 GLU 121
VAL 227 0.18 CYS 113 -0.21 ALA 122
VAL 227 0.18 PRO 114 -0.14 PRO 45
ARG 120 0.23 GLY 115 -0.18 PRO 45
ARG 120 0.44 SER 116 -0.18 PRO 45
ARG 120 0.47 HIS 117 -0.13 PRO 45
PRO 119 0.37 ARG 118 -0.14 PRO 45
VAL 190 0.48 PRO 119 -0.14 ARG 208
SER 192 0.63 ARG 120 -0.28 GLY 137
SER 192 0.41 GLU 121 -0.51 GLY 137
THR 191 0.27 ALA 122 -0.35 CYS 125
SER 192 0.34 LYS 123 -0.26 ARG 208
SER 192 0.26 SER 124 -0.35 ARG 208
SER 192 0.19 CYS 125 -0.35 ALA 122
SER 192 0.19 GLY 126 -0.30 PRO 45
SER 192 0.16 GLY 127 -0.30 PRO 45
VAL 227 0.15 PRO 128 -0.37 PRO 45
VAL 227 0.14 ASP 129 -0.50 PRO 45
VAL 227 0.15 SER 130 -0.36 PRO 45
VAL 227 0.17 PHE 131 -0.27 PRO 45
VAL 227 0.16 TYR 132 -0.31 ALA 122
VAL 227 0.16 CYS 133 -0.33 ALA 122
VAL 227 0.15 ALA 134 -0.35 ARG 208
SER 192 0.15 SER 135 -0.44 ARG 208
VAL 227 0.15 TRP 136 -0.42 GLU 121
VAL 227 0.15 GLY 137 -0.51 GLU 121
VAL 227 0.16 CYS 138 -0.38 GLU 121
VAL 227 0.17 GLU 139 -0.28 GLU 121
THR 162 0.18 THR 140 -0.20 GLU 121
THR 162 0.19 THR 141 -0.13 GLU 121
VAL 227 0.19 GLY 142 -0.16 VAL 32
VAL 227 0.18 ARG 143 -0.18 VAL 32
VAL 227 0.17 VAL 144 -0.19 GLU 121
VAL 227 0.15 TYR 145 -0.20 GLU 121
VAL 227 0.14 TRP 146 -0.23 GLU 121
THR 162 0.18 LYS 147 -0.20 GLU 121
THR 162 0.18 PRO 148 -0.23 GLU 121
THR 162 0.25 SER 149 -0.21 GLU 121
THR 162 0.23 SER 150 -0.17 GLU 121
ARG 226 0.24 SER 151 -0.07 GLU 121
ARG 226 0.25 TRP 152 -0.09 PRO 45
PRO 119 0.21 ASP 153 -0.08 PRO 45
PRO 119 0.26 TYR 154 -0.07 PRO 45
VAL 227 0.23 ILE 155 -0.09 LYS 147
LEU 161 0.25 THR 156 -0.14 LYS 147
VAL 227 0.23 VAL 157 -0.20 ILE 181
ASN 159 0.25 ASP 158 -0.20 VAL 32
ASP 158 0.25 ASN 159 -0.20 SER 21
VAL 227 0.28 ASN 160 -0.25 SER 21
VAL 227 0.26 LEU 161 -0.25 SER 21
SER 149 0.25 THR 162 -0.27 SER 69
VAL 227 0.23 THR 163 -0.30 SER 69
VAL 227 0.24 SER 164 -0.37 SER 69
VAL 227 0.27 GLN 165 -0.34 SER 69
VAL 227 0.27 ALA 166 -0.31 SER 69
VAL 227 0.27 VAL 167 -0.39 SER 69
VAL 227 0.30 GLN 168 -0.44 SER 69
VAL 227 0.32 VAL 169 -0.35 SER 69
VAL 227 0.30 CYS 170 -0.33 SER 69
VAL 227 0.31 LYS 171 -0.47 SER 69
VAL 227 0.35 ASP 172 -0.42 SER 69
VAL 227 0.33 ASN 173 -0.29 GLY 70
VAL 227 0.35 LYS 174 -0.24 SER 69
VAL 227 0.32 TRP 175 -0.21 GLN 221
VAL 227 0.30 CYS 176 -0.22 SER 69
VAL 227 0.27 ASN 177 -0.20 GLN 221
VAL 227 0.29 PRO 178 -0.22 SER 21
VAL 227 0.28 LEU 179 -0.20 SER 21
VAL 227 0.30 ALA 180 -0.20 SER 21
VAL 227 0.29 ILE 181 -0.20 VAL 157
VAL 227 0.29 GLN 182 -0.16 LYS 147
VAL 227 0.27 PHE 183 -0.12 LYS 147
ARG 226 0.28 THR 184 -0.10 LYS 147
ARG 226 0.34 ASN 185 -0.07 LYS 147
ARG 226 0.29 ALA 186 -0.09 HIS 197
ARG 120 0.34 GLY 187 -0.07 GLY 196
ARG 120 0.34 LYS 188 -0.06 SER 192
ARG 120 0.43 GLN 189 -0.07 ARG 14
ARG 120 0.55 VAL 190 -0.10 SER 192
ARG 120 0.59 THR 191 -0.09 GLU 15
ARG 120 0.63 SER 192 -0.10 GLU 15
ARG 120 0.48 TRP 193 -0.10 GLU 15
ARG 120 0.48 THR 194 -0.13 PRO 225
ARG 120 0.50 THR 195 -0.14 ARG 14
ARG 120 0.40 GLY 196 -0.12 ARG 14
ARG 120 0.36 HIS 197 -0.09 GLY 44
ARG 120 0.23 TYR 198 -0.11 GLY 44
VAL 227 0.19 TRP 199 -0.13 PRO 45
VAL 227 0.18 GLY 200 -0.19 ALA 122
VAL 227 0.19 LEU 201 -0.18 ALA 122
VAL 227 0.18 ARG 202 -0.22 ALA 122
VAL 227 0.19 LEU 203 -0.22 GLU 121
VAL 227 0.17 TYR 204 -0.25 GLU 121
VAL 227 0.17 VAL 205 -0.26 GLU 121
VAL 227 0.16 SER 206 -0.29 GLU 121
VAL 227 0.16 GLY 207 -0.37 SER 135
VAL 227 0.16 ARG 208 -0.44 SER 135
VAL 227 0.17 ASP 209 -0.38 SER 135
VAL 227 0.18 PRO 210 -0.32 ALA 134
VAL 227 0.18 GLY 211 -0.25 ALA 122
VAL 227 0.19 LEU 212 -0.21 ALA 122
VAL 227 0.19 THR 213 -0.19 GLY 44
VAL 227 0.21 PHE 214 -0.15 GLN 221
VAL 227 0.22 GLY 215 -0.13 GLN 221
ARG 120 0.26 ILE 216 -0.14 GLN 221
ARG 120 0.34 ARG 217 -0.15 GLN 221
ARG 120 0.36 LEU 218 -0.16 GLN 221
ARG 120 0.35 ARG 219 -0.26 GLN 221
ARG 120 0.36 TYR 220 -0.27 GLN 221
VAL 227 0.33 GLN 221 -0.30 THR 16
ARG 120 0.34 ASN 222 -0.27 PRO 225
VAL 227 0.45 LEU 223 -0.26 TYR 56
ARG 120 0.31 GLY 224 -0.37 PRO 225
PRO 228 0.29 PRO 225 -0.37 GLY 224
HIS 24 0.49 ARG 226 -0.25 GLY 224
GLY 22 0.68 VAL 227 -0.20 GLN 1
ARG 120 0.29 PRO 228 -0.13 ALA 54

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.