Should you encounter any unexpected behaviour,
please let us know.

* 1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 *

CA distance fluctuations for 240220085926145927

--- normal mode 9 ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok

largest increase ref largest decrease
GLY 57 0.33 ALA 1 -0.66 THR 47

ALA 56 0.37 ALA 2 -0.36 THR 47

ASN 191 0.24 PRO 3 -0.36 GLY 159

ASN 191 0.25 TYR 4 -0.38 GLY 159

ASN 191 0.26 GLU 5 -0.41 GLY 160

ASN 191 0.24 ASN 6 -0.47 GLY 160

ASN 191 0.26 LEU 7 -0.44 GLY 160

ASN 191 0.24 MET 8 -0.46 GLY 160

ASN 191 0.24 VAL 9 -0.39 GLY 160

ASN 191 0.21 PRO 10 -0.40 GLU 77

PRO 40 0.22 SER 11 -0.40 GLU 77

PRO 40 0.21 PRO 12 -0.42 GLU 77

PRO 40 0.19 SER 13 -0.47 GLU 77

PRO 40 0.23 MET 14 -0.51 GLU 77

PRO 40 0.24 GLY 15 -0.62 GLY 80

PRO 40 0.35 ARG 16 -0.42 GLY 80

ASP 41 0.25 ASP 17 -0.43 SER 81

ASP 41 0.26 ILE 18 -0.45 VAL 161

THR 192 0.20 PRO 19 -0.51 GLY 160

THR 192 0.23 VAL 20 -0.44 ALA 69

ASN 191 0.23 ALA 21 -0.45 ALA 69

ASN 191 0.29 PHE 22 -0.37 ALA 69

ASN 191 0.30 LEU 23 -0.34 ALA 69

ASN 191 0.35 ALA 24 -0.29 ALA 69

ASN 235 0.37 GLY 25 -0.27 ALA 69

ASN 191 0.44 GLY 26 -0.24 ALA 69

ASN 191 0.48 PRO 27 -0.23 ALA 69

ASN 191 0.52 HIS 28 -0.21 ALA 69

ASN 191 0.40 ALA 29 -0.23 ALA 69

THR 192 0.32 VAL 30 -0.22 ALA 69

THR 192 0.25 TYR 31 -0.23 ALA 69

THR 192 0.16 LEU 32 -0.26 LEU 33

ARG 16 0.18 LEU 33 -0.26 LEU 32

ARG 16 0.19 ASP 34 -0.33 ALA 1

ARG 16 0.14 ALA 35 -0.35 ALA 1

GLY 80 0.12 PHE 36 -0.38 ALA 1

ALA 69 0.28 ASN 37 -0.45 ALA 1

ARG 16 0.18 ALA 38 -0.47 ALA 1

ARG 16 0.26 GLY 39 -0.58 GLY 159

ARG 16 0.35 PRO 40 -0.74 GLY 159

ARG 16 0.33 ASP 41 -0.61 GLY 159

ARG 16 0.25 VAL 42 -0.52 GLY 159

ARG 16 0.24 SER 43 -0.48 ALA 1

ARG 16 0.22 ASN 44 -0.50 ALA 1

ARG 16 0.18 TRP 45 -0.36 ALA 1

PRO 19 0.17 VAL 46 -0.53 ALA 1

ARG 16 0.20 THR 47 -0.66 ALA 1

ARG 16 0.20 ALA 48 -0.46 ALA 1

ARG 16 0.16 GLY 49 -0.29 ALA 1

ASN 6 0.15 ASN 50 -0.29 ALA 1

GLN 254 0.20 ALA 51 -0.22 ALA 69

GLY 256 0.21 MET 52 -0.27 GLY 159

ALA 257 0.17 ASN 53 -0.23 GLY 159

GLY 256 0.27 THR 54 -0.17 ALA 69

MET 258 0.29 LEU 55 -0.22 ALA 69

ALA 2 0.37 ALA 56 -0.26 ALA 69

ALA 2 0.37 GLY 57 -0.23 ALA 69

ASN 235 0.33 LYS 58 -0.21 ALA 69

ASN 235 0.41 GLY 59 -0.21 ALA 69

ASN 235 0.40 ILE 60 -0.24 ALA 69

ASN 235 0.38 SER 61 -0.27 ALA 69

ASN 235 0.31 VAL 62 -0.32 ALA 69

THR 192 0.27 VAL 63 -0.33 ALA 69

THR 192 0.21 ALA 64 -0.42 ALA 69

THR 192 0.19 PRO 65 -0.43 ALA 69

ARG 16 0.24 ALA 66 -0.56 ALA 69

ARG 16 0.22 GLY 67 -0.48 GLY 159

MET 14 0.17 GLY 68 -0.44 ALA 69

ASN 37 0.28 ALA 69 -0.56 ALA 66

GLN 78 0.14 TYR 70 -0.38 ALA 1

ASP 79 0.13 SER 71 -0.33 PRO 19

ASP 79 0.11 MET 72 -0.27 ALA 1

GLY 80 0.12 TYR 73 -0.25 ALA 1

ASP 79 0.14 THR 74 -0.28 ARG 174

ASP 79 0.17 ASN 75 -0.41 TRP 167

ASP 79 0.12 TRP 76 -0.39 TRP 167

HIS 178 0.16 GLU 77 -0.54 GLY 15

GLY 159 0.17 GLN 78 -0.54 GLY 15

ASN 75 0.17 ASP 79 -0.48 GLY 15

ASN 37 0.14 GLY 80 -0.62 GLY 15

ASN 37 0.17 SER 81 -0.45 GLY 15

ASN 37 0.15 LYS 82 -0.42 ILE 18

ASN 37 0.11 GLN 83 -0.41 TRP 167

ASP 85 0.16 TRP 84 -0.33 TRP 167

TRP 84 0.16 ASP 85 -0.35 ARG 174

PRO 40 0.13 THR 86 -0.38 ARG 174

ASN 190 0.17 PHE 87 -0.35 TRP 167

ALA 123 0.22 LEU 88 -0.26 ARG 174

ASN 190 0.21 SER 89 -0.28 ARG 174

GLU 91 0.24 ALA 90 -0.33 LEU 172

ASN 190 0.24 GLU 91 -0.33 LEU 172

ASN 191 0.27 LEU 92 -0.28 TRP 167

ASN 191 0.35 PRO 93 -0.24 LEU 172

ASN 190 0.34 ASP 94 -0.29 LEU 172

ASN 191 0.33 TRP 95 -0.33 SER 11

ASN 191 0.37 LEU 96 -0.27 GLU 77

ASN 191 0.44 ALA 97 -0.24 GLU 77

ASN 191 0.38 ALA 98 -0.29 PRO 12

ASN 191 0.36 ASN 99 -0.30 GLY 160

ASN 191 0.39 ARG 100 -0.29 GLY 160

ASN 191 0.42 GLY 101 -0.25 GLY 160

ASN 191 0.47 LEU 102 -0.23 ALA 69

ASN 191 0.55 ALA 103 -0.22 PRO 93

ASN 191 0.48 PRO 104 -0.23 ALA 90

ASN 191 0.57 GLY 105 -0.18 ARG 174

ASN 191 0.72 GLY 106 -0.21 ARG 267

THR 192 0.51 HIS 107 -0.17 ARG 267

PHE 132 0.42 ALA 108 -0.16 VAL 263

THR 192 0.19 ALA 109 -0.16 VAL 263

LEU 32 0.16 VAL 110 -0.14 SER 259

ARG 16 0.16 GLY 111 -0.16 ALA 1

ARG 16 0.14 ALA 112 -0.20 ALA 1

GLN 171 0.16 ALA 113 -0.23 ALA 1

GLN 78 0.11 GLN 114 -0.25 ALA 1

ARG 16 0.13 GLY 115 -0.22 ALA 1

GLN 171 0.12 GLY 116 -0.15 ALA 1

GLN 171 0.10 TYR 117 -0.16 ALA 1

GLY 80 0.12 GLY 118 -0.18 ALA 1

LEU 88 0.15 ALA 119 -0.12 TRP 177

LEU 88 0.13 MET 120 -0.10 TRP 177

ASP 79 0.13 ALA 121 -0.15 TRP 177

LEU 88 0.18 LEU 122 -0.20 TRP 177

LEU 88 0.22 ALA 123 -0.13 ASP 261

ALA 184 0.17 ALA 124 -0.13 ARG 193

LEU 186 0.15 PHE 125 -0.22 TRP 177

LEU 186 0.22 HIS 126 -0.20 ARG 174

LEU 186 0.33 PRO 127 -0.28 GLY 131

ASN 190 0.39 ASP 128 -0.25 ALA 265

ASN 190 0.43 ARG 129 -0.19 ARG 174

THR 192 0.46 PHE 130 -0.21 ALA 265

THR 192 0.62 GLY 131 -0.28 PRO 127

ALA 108 0.42 PHE 132 -0.21 PRO 127

ALA 108 0.21 ALA 133 -0.11 ASP 261

VAL 62 0.17 GLY 134 -0.07 PRO 127

GLN 171 0.14 SER 135 -0.08 ALA 188

GLN 171 0.17 MET 136 -0.11 HIS 234

GLN 171 0.22 SER 137 -0.17 SER 221

GLN 171 0.20 GLY 138 -0.15 ALA 1

GLN 171 0.23 PHE 139 -0.16 ALA 1

GLN 171 0.20 LEU 140 -0.11 ALA 1

GLN 171 0.24 TYR 141 -0.12 PRO 40

GLN 171 0.27 PRO 142 -0.18 PRO 40

GLN 171 0.30 SER 143 -0.19 GLY 15

GLN 171 0.41 ASN 144 -0.18 PRO 40

GLN 171 0.58 THR 145 -0.24 PRO 40

GLN 171 0.49 THR 146 -0.24 PRO 40

GLN 171 0.41 THR 147 -0.23 PRO 40

GLN 171 0.49 ASN 148 -0.28 PRO 40

GLN 171 0.58 GLY 149 -0.32 PRO 40

GLN 171 0.42 ALA 150 -0.31 PRO 40

GLN 171 0.33 ILE 151 -0.33 PRO 40

GLN 171 0.35 ALA 152 -0.39 PRO 40

GLN 171 0.37 ALA 153 -0.39 PRO 40

GLN 171 0.29 GLY 154 -0.41 PRO 40

GLN 171 0.19 MET 155 -0.47 PRO 40

ALA 169 0.25 GLN 156 -0.53 PRO 40

GLN 171 0.24 GLN 157 -0.51 PRO 40

GLN 171 0.20 PHE 158 -0.60 PRO 40

VAL 161 0.20 GLY 159 -0.74 PRO 40

ALA 169 0.15 GLY 160 -0.68 PRO 40

GLY 159 0.20 VAL 161 -0.55 PRO 40

GLY 168 0.20 ASP 162 -0.43 PRO 40

TRP 167 0.18 THR 163 -0.36 ILE 18

GLY 168 0.29 ASN 164 -0.41 GLY 15

GLY 159 0.18 GLY 165 -0.45 GLY 15

GLY 159 0.15 MET 166 -0.37 GLY 15

ASN 164 0.21 TRP 167 -0.41 ASN 75

ASN 164 0.29 GLY 168 -0.45 GLY 15

ALA 152 0.31 ALA 169 -0.44 GLY 15

GLY 149 0.34 PRO 170 -0.33 GLY 15

GLY 149 0.58 GLN 171 -0.38 GLY 15

GLY 149 0.38 LEU 172 -0.46 GLY 15

ASN 144 0.26 GLY 173 -0.32 GLY 15

ALA 152 0.19 ARG 174 -0.38 THR 86

TRP 177 0.14 TRP 175 -0.24 GLY 15

TRP 177 0.11 LYS 176 -0.18 THR 86

ASN 164 0.14 TRP 177 -0.25 ASP 85

GLU 77 0.16 HIS 178 -0.19 ASP 85

GLU 77 0.11 ASP 179 -0.12 ALA 1

GLY 106 0.16 PRO 180 -0.07 ALA 1

GLY 106 0.20 TRP 181 -0.08 ALA 215

GLY 106 0.17 VAL 182 -0.06 ALA 215

GLY 106 0.20 HIS 183 -0.07 ALA 242

GLY 106 0.32 ALA 184 -0.11 THR 200

GLY 106 0.34 SER 185 -0.13 ASP 239

GLY 106 0.34 LEU 186 -0.15 HIS 237

GLY 106 0.45 LEU 187 -0.17 HIS 237

GLY 106 0.50 ALA 188 -0.19 HIS 237

GLY 106 0.47 GLN 189 -0.17 HIS 237

GLY 106 0.61 ASN 190 -0.16 HIS 237

GLY 106 0.72 ASN 191 -0.20 HIS 237

GLY 106 0.66 THR 192 -0.19 ARG 193

ILE 266 0.49 ARG 193 -0.19 THR 192

ALA 265 0.30 VAL 194 -0.14 ASN 191

GLY 264 0.25 TRP 195 -0.13 ASN 191

SER 221 0.24 VAL 196 -0.17 GLY 236

MET 258 0.20 TRP 197 -0.17 HIS 234

GLN 171 0.25 SER 198 -0.17 HIS 234

GLN 171 0.24 PRO 199 -0.18 TYR 225

GLN 171 0.28 THR 200 -0.22 ASN 226

GLN 171 0.26 ASN 201 -0.20 ASN 226

GLN 171 0.30 PRO 202 -0.19 ASN 226

GLN 171 0.27 GLY 203 -0.20 ALA 1

GLN 171 0.24 ALA 204 -0.26 ALA 1

GLN 171 0.20 SER 205 -0.31 ALA 1

GLN 171 0.19 ASP 206 -0.39 ALA 1

GLN 171 0.22 PRO 207 -0.37 ALA 1

GLN 171 0.18 ALA 208 -0.44 ALA 1

GLN 171 0.16 ALA 209 -0.41 ALA 1

GLN 171 0.22 MET 210 -0.31 ALA 1

GLN 171 0.23 ILE 211 -0.35 ALA 1

GLN 171 0.28 GLY 212 -0.31 ALA 1

GLN 171 0.32 GLN 213 -0.25 ALA 1

GLN 171 0.28 ALA 214 -0.20 ALA 1

GLN 171 0.32 ALA 215 -0.18 GLY 219

GLN 171 0.35 GLU 216 -0.17 PRO 40

GLN 171 0.31 ALA 217 -0.16 ALA 1

GLN 171 0.30 MET 218 -0.17 ASN 226

GLN 171 0.33 GLY 219 -0.18 ALA 215

GLN 171 0.30 ASN 220 -0.13 MET 223

GLN 171 0.26 SER 221 -0.17 SER 137

GLY 264 0.28 ARG 222 -0.24 ASN 226

GLN 171 0.27 MET 223 -0.16 ALA 215

GLY 264 0.27 PHE 224 -0.13 MET 218

GLY 264 0.35 TYR 225 -0.20 THR 200

GLY 264 0.34 ASN 226 -0.24 ARG 222

GLY 264 0.29 GLN 227 -0.18 ARG 222

ALA 265 0.36 TYR 228 -0.17 THR 200

ALA 265 0.43 ARG 229 -0.21 ALA 242

ALA 265 0.36 SER 230 -0.20 ALA 242

GLY 106 0.37 VAL 231 -0.16 ALA 242

GLY 106 0.44 GLY 232 -0.19 ALA 242

ALA 265 0.49 GLY 233 -0.19 ASP 239

ALA 265 0.61 HIS 234 -0.24 ASP 239

ALA 265 0.70 ASN 235 -0.21 HIS 237

ALA 265 0.59 GLY 236 -0.40 HIS 237

GLY 264 0.49 HIS 237 -0.40 GLY 236

GLY 264 0.35 PHE 238 -0.30 ASP 239

GLY 260 0.34 ASP 239 -0.30 PHE 238

GLY 260 0.26 PHE 240 -0.21 HIS 234

ALA 257 0.31 PRO 241 -0.21 HIS 234

ALA 257 0.26 ALA 242 -0.21 ARG 229

ALA 257 0.26 SER 243 -0.17 HIS 234

PRO 253 0.22 GLY 244 -0.15 HIS 234

GLN 171 0.21 ASP 245 -0.15 ASN 226

GLN 171 0.22 ASN 246 -0.19 ALA 1

GLN 171 0.17 GLY 247 -0.24 ALA 1

ARG 16 0.17 TRP 248 -0.28 ALA 1

ARG 16 0.16 GLY 249 -0.19 ALA 1

GLY 244 0.17 SER 250 -0.14 PHE 238

GLY 244 0.16 TRP 251 -0.13 ALA 1

ARG 16 0.16 ALA 252 -0.12 ALA 1

SER 243 0.24 PRO 253 -0.08 ASP 261

LEU 255 0.22 GLN 254 -0.09 GLY 236

GLN 254 0.22 LEU 255 -0.13 SER 259

THR 54 0.27 GLY 256 -0.11 GLY 260

PRO 241 0.31 ALA 257 -0.10 PRO 127

ASP 239 0.30 MET 258 -0.12 PRO 127

HIS 237 0.31 SER 259 -0.14 ALA 69

HIS 237 0.39 GLY 260 -0.15 ASP 128

HIS 237 0.41 ASP 261 -0.18 PRO 127

HIS 237 0.34 ILE 262 -0.16 PRO 127

ASN 235 0.46 VAL 263 -0.17 ALA 69

ASN 235 0.59 GLY 264 -0.18 ASP 128

ASN 235 0.70 ALA 265 -0.25 ASP 128

ASN 235 0.59 ILE 266 -0.19 ASP 128

ASN 235 0.58 ARG 267 -0.21 GLY 106

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 ***

CA distance fluctuations for 240220085926145927

--- normal mode 9 ---

Should you encounter any unexpected behaviour,
please let us know.

* 1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 *