Protein Expression tracks are color-coded from white (no protein detected) to dark purple (highly expressed protein) in the time-course experiment of A. castellanii infection with Mollivirus. Transcriptome data is coded from white (no mRNA expression) to black (highly expressed). Transcriptome data is taken from the published RNA-seq datasets of A. castellanii in various growth conditions : Clarke M, et al. (2013) Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling. Genome Biol 14(2):R11.

 

 

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Landmark or Region: Examples: scaffold5, tubulin, g5-37354-38760.	Annotate Restriction Sites Download Decorated FASTA File Download Sequence File Download Track Data
Data Source A. castellanii (Cellular host) Acanthamoeba_castellanii Neff (Cellular host) Mimivirus Mollivirus Pandoravirus dulcis Pandoravirus inopinatum Pandoravirus macleodensis Pandoravirus neocaledonia Pandoravirus quercus Pandoravirus salinus	Scroll/Zoom:     Show 500 kbp Show 200 kbp Show 100 kbp Show 50 kbp Show 20 kbp Show 10 kbp Show 5 kbp Show 2.104 kbp Show 2 kbp Show 1 kbp Show 200 bp Show 100 bp     Flip

The following 27 regions match your request.

 

scaffold593

 

scaffold40

 

scaffold297

 

 

scaffold490

 

scaffold218

 

scaffold1306

 

scaffold935

 

 

scaffold1196

 

scaffold1390

 

scaffold185

 

 

scaffold514

 

scaffold1359

 

scaffold254

 

scaffold631

 

scaffold993

 

scaffold605

 

scaffold557

 

 

scaffold611

 

 

 

 

 

scaffoldunplaced

Name	Type	Description	Position	Match Score
g593-408807-410628	mRNA:AUGUSTUS	Tubulin alpha1a chain	scaffold593:408807..410628	10
g40-197330-199538	mRNA:AUGUSTUS	Tubulin beta1 chain	scaffold40:197330..199538	10
g297-9636-16046	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffold297:9636..16046	10
g490-26711-29116	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffold490:26711..29116	10
g490-248906-252070	mRNA:AUGUSTUS	Tubulin tyrosine ligaselike family	scaffold490:248906..252070	10
g218-333818-335128	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffold218:333818..335128	10
g1306-199336-204160	mRNA:AUGUSTUS	Tubulin-tyrosine ligase family protein	scaffold1306:199336..204160	10
g935-916324-919345	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffold935:916324..919345	10
g1196-48503-49249	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffold1196:48503..49249	10
g1196-53444-56761	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffold1196:53444..56761	10
g1390-714707-716810	mRNA:AUGUSTUS	Alpha tubulin	scaffold1390:714707..716810	10
g185-712580-713226	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffold185:712580..713226	10
g514-94327-97038	mRNA:AUGUSTUS	Tubulintyrosine ligase family protein	scaffold514:94327..97038	10
g514-334087-334778	mRNA:AUGUSTUS	Tubulin binding cofactor A	scaffold514:334087..334778	10
g1359-172261-174677	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffold1359:172261..174677	10
g254-652116-653700	mRNA:AUGUSTUS	Alpha tubulin	scaffold254:652116..653700	10
g631-162107-163748	mRNA:AUGUSTUS	Tubulin beta chain	scaffold631:162107..163748	10
g993-822880-824192	mRNA:AUGUSTUS	Tubulin folding cofactor C	scaffold993:822880..824192	10
g605-1-1938	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffold605:1..1938	10
g557-929696-934237	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffold557:929696..934237	10
g611-157106-157765	mRNA:AUGUSTUS	Tubulin beta1 chain	scaffold611:157106..157765	10
g611-157856-158838	mRNA:AUGUSTUS	Tubulin beta1 chain	scaffold611:157856..158838	10
gunplaced-1068049-1075107	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffoldunplaced:1068049..1075107	10
gunplaced-2153430-2156886	mRNA:AUGUSTUS	Tubulin beta chain	scaffoldunplaced:2153430..2156886	10
gunplaced-2470018-2471892	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffoldunplaced:2470018..2471892	10
gunplaced-2551692-2551997	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffoldunplaced:2551692..2551997	10
gunplaced-2685721-2687125	mRNA:AUGUSTUS	Tubulin/FtsZ family	scaffoldunplaced:2685721..2687125	10

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